STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_1992DUF1339 domain protein. (1065 aa)    
Predicted Functional Partners:
T310_9530
Intracellular protein transport protein (Sat1).
    
 0.976
T310_10011
RAS small monomeric GTPase Rab6.
    
 0.942
T310_1967
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
 
  
   0.871
T310_0240
Anucleate primary sterigmata (ApsB).
    
 0.843
T310_8284
Dor1-like family protein.
   
 0.841
T310_7877
ADP-ribosylation factor family protein.
    
 0.834
T310_2888
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.781
T310_0608
ADP ribosylation factor A (Eurofung); Belongs to the small GTPase superfamily. Arf family.
    
  0.775
T310_3413
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.770
T310_4284
Endosomal peripheral membrane protein (Mon2).
  
 
 0.730
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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