STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH45291.1Diguanylate cyclase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (116 aa)    
Predicted Functional Partners:
KOH46158.1
TIGRFAM: folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Pfam: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK).
 
 
 0.988
KOH44419.1
TIGRFAM: DHPS: dihydropteroate synthase; Pfam: Pterin binding enzyme.
 
 
 0.981
KOH44381.1
Pfam: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
 
 
 0.965
folE
TIGRFAM: folE: GTP cyclohydrolase I; Pfam: GTP cyclohydrolase I.
 
 
 0.902
KOH43169.1
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; Pfam: Deoxynucleoside kinase.
  
 
 0.902
folE-2
Pfam: GTP cyclohydrolase I; TIGRFAM: folE: GTP cyclohydrolase I.
 
 
 0.892
KOH45797.1
Tetrahydrofolate synthase; TIGRFAM: folC: bifunctional protein FolC; Pfam: Mur ligase middle domain; Belongs to the folylpolyglutamate synthase family.
  
 
 0.636
glnS
Pfam: tRNA synthetases class I (E and Q), anti-codon binding domain; PRINTS: Glutamyl-tRNA synthetase signature; Pfam: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glnS: glutamine--tRNA ligase.
       0.569
KOH47004.1
Pfam: 6-pyruvoyl tetrahydropterin synthase.
    
 0.467
KOH46495.1
Hypothetical protein; Pfam: NUDIX domain; PRINTS: NUDIX hydrolase family signature; Belongs to the Nudix hydrolase family.
 
  
  0.455
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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