STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43716.1Sulfurtransferase; SMART: Rhodanese Homology Domain; Pfam: Rhodanese-like domain. (152 aa)    
Predicted Functional Partners:
KOH43718.1
Sulfurtransferase; Pfam: Thioredoxin domain.
      0.920
KOH43719.1
Electron transporter RnfE; Pfam: Short C-terminal domain.
 
     0.828
KOH43717.1
Hypothetical protein; Pfam: Domain of unknown function DUF302.
 
     0.811
KOH44794.1
Hypothetical protein; Pfam: Nitrite and sulphite reductase 4Fe-4S domain; PRINTS: Sirohaem Fe-binding site signature; Pfam: Nitrite/Sulfite reductase ferredoxin-like half domain; Pfam: Sulfurtransferase TusA.
  
 0.733
KOH43068.1
Hypothetical protein; Pfam: Pyridine nucleotide-disulphide oxidoreductase; PRINTS: Pyridine nucleotide disulphide reductase class-I signature; SMART: Rhodanese Homology Domain; Pfam: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Pfam: Rhodanese-like domain; PRINTS: FAD-dependent pyridine nucleotide reductase signature.
  
 0.706
KOH43720.1
Pfam: LTXXQ motif family protein.
       0.704
KOH45742.1
FAD-binding protein; Pfam: 4Fe-4S dicluster domain; Pfam: FAD linked oxidases, C-terminal domain.
    
 0.685
KOH44347.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.660
KOH43713.1
NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NuoD: NADH dehydrogenase (quinone), D subunit; Pfam: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C; Pfam: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
  
 0.587
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.582
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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