STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43090.1Pfam: CotH protein; TIGRFAM: Por_Secre_tail: Por secretion system C-terminal sorting domain. (537 aa)    
Predicted Functional Partners:
KOH43091.1
Hypothetical protein; Pfam: F5/8 type C domain.
  
  
 0.570
KOH43093.1
Hypothetical protein; Pfam: Starch-binding associating with outer membrane; Pfam: SusD family.
    
  0.525
KOH43092.1
Hypothetical protein; Pfam: F5/8 type C domain.
       0.521
KOH43094.1
Collagen-binding protein; Pfam: Domain of unknown function (DUF4480); TIGRFAM: SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; Pfam: Secretin and TonB N terminus short domain; SMART: Secretin and TonB N terminus short domain; TIGRFAM: OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family; Pfam: TonB-dependent Receptor Plug Domain; Pfam: TonB dependent receptor.
       0.493
KOH43908.1
Hypothetical protein; Pfam: Cytochrome c554 and c-prime.
  
    0.473
KOH42877.1
Glycoside hydrolase; Pfam: Carbohydrate-binding module 48 (Isoamylase N-terminal domain).
  
  
  0.470
KOH44938.1
Hypothetical protein; Pfam: O-Glycosyl hydrolase family 30.
  
     0.453
KOH46026.1
Endoglucanase; Pfam: N-terminal ig-like domain of cellulase; Pfam: Glycosyl hydrolase family 9.
  
     0.446
KOH43771.1
Hypothetical protein; SMART: Alpha-amylase domain; Pfam: Alpha amylase, catalytic domain; TIGRFAM: Por_Secre_tail: Por secretion system C-terminal sorting domain; Belongs to the glycosyl hydrolase 13 family.
  
  
  0.438
nadA-2
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
       0.437
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.