STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V497_04893Uncharacterized protein. (478 aa)    
Predicted Functional Partners:
V497_08602
CDC73_C domain-containing protein.
    
 0.747
V497_05656
TPR_REGION domain-containing protein.
    
 0.745
V497_06814
Uncharacterized protein.
    
 0.744
V497_01317
DOC domain-containing protein.
    
 0.743
V497_06672
Uncharacterized protein.
    
 0.741
V497_03837
Uncharacterized protein.
    
 0.740
V497_03232
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.738
V497_06350
Uncharacterized protein.
    
 0.735
V497_05549
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.730
V497_06293
RING-type domain-containing protein.
    
 0.727
Your Current Organism:
Pseudogymnoascus sp. VKMF4516
NCBI taxonomy Id: 1420910
Other names: P. sp. VKM F-4516 (FW-969), Pseudogymnoascus sp. VKM F-4516 (FW-969)
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.