STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V497_01459Proteasome subunit beta; Belongs to the peptidase T1B family. (253 aa)    
Predicted Functional Partners:
V497_07241
Pr_beta_C domain-containing protein.
   
 0.999
V497_04655
Proteasome subunit alpha type.
   
 0.999
V497_04397
VWFA domain-containing protein.
   
 0.999
V497_03998
Proteasome subunit beta.
   
 0.999
V497_02581
Proteasome subunit alpha type.
   
 0.999
V497_06601
Proteasome subunit alpha type.
   
 0.999
V497_02022
Proteasome endopeptidase complex.
   
 0.999
V497_01993
Uncharacterized protein.
   
 0.999
V497_01450
Uncharacterized protein.
   
 0.999
V497_01212
Uncharacterized protein.
   
 0.999
Your Current Organism:
Pseudogymnoascus sp. VKMF4516
NCBI taxonomy Id: 1420910
Other names: P. sp. VKM F-4516 (FW-969), Pseudogymnoascus sp. VKM F-4516 (FW-969)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.