STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V497_01888Uncharacterized protein. (605 aa)    
Predicted Functional Partners:
V497_05884
HECT domain-containing protein.
   
  
 0.965
V497_04757
Ubiquitin-like domain-containing protein.
    
   0.800
V497_07371
Uncharacterized protein.
     
 0.634
V497_08825
BZIP domain-containing protein.
    
   0.616
V497_06678
Ribosomal_S27 domain-containing protein.
    
   0.616
V497_02779
BZIP domain-containing protein.
    
   0.616
V497_04583
BZIP domain-containing protein.
    
   0.616
V497_08259
MIF4G domain-containing protein.
   
   0.597
V497_06652
Uncharacterized protein.
   
   0.597
V497_03659
Uncharacterized protein.
   
   0.597
Your Current Organism:
Pseudogymnoascus sp. VKMF4516
NCBI taxonomy Id: 1420910
Other names: P. sp. VKM F-4516 (FW-969), Pseudogymnoascus sp. VKM F-4516 (FW-969)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.