STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHI28171.1Copper resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
AHI30179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.757
AHI29879.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.699
AHI28170.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.673
AHI30005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.627
AHI30006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.583
AHI28917.1
Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.458
AHI27649.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.410
Your Current Organism:
Marinobacter similis
NCBI taxonomy Id: 1420916
Other names: CIP 110589, JCM 19398, KMM 7501, M. similis, Marinobacter similis Ng et al. 2015, Marinobacter sp. A3d10, Marinobacter sp. JCM 19398, strain A3d10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.