STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95376.1Carbamate kinase; Belongs to the carbamate kinase family. (313 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.966
KRK94332.1
Glutamine synthetase.
     
 0.962
KRK95377.1
Hypothetical protein.
      0.929
KRK95378.1
Hypothetical protein.
 
  
 0.856
carA
Carbamoyl phosphate synthase small subunit; Belongs to the CarA family.
     
 0.848
carA-2
Carbamoyl phosphate synthase small subunit; Belongs to the CarA family.
     
 0.848
KRK95379.1
Membrane protein.
 
  
 0.847
KRK95380.1
Ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.690
KRK95381.1
Allantoin catabolism protein.
       0.637
KRK95375.1
Short-chain alcohol dehydrogenase.
  
    0.585
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.