STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK46076.1CDP-glycerol poly(glycerophosphate) glycerophosphotransferase. (1144 aa)    
Predicted Functional Partners:
KRK46650.1
ABC-2 type transporter.
 
  
 0.743
KRK46080.1
Teichoic acid translocation ATP-binding protein.
 
  
 0.677
tagH
ABC-type polysaccharide polyol phosphate transport system, ATPase component; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
 
  
 0.645
KRK46078.1
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.602
KRK45049.1
Hsds variable domain.
  
 
 0.498
KRK46075.1
Sugar phosphatase isomerase.
       0.446
KRK45527.1
Hypothetical protein.
  
 
 0.445
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.436
KRK46079.1
CDP-glycerol poly(glycerophosphate) glycerophosphotransferase.
 
   
0.433
KRK46073.1
2-dehydro-3-deoxygluconokinase.
       0.429
Your Current Organism:
Lactobacillus algidus
NCBI taxonomy Id: 1423719
Other names: L. algidus DSM 15638, Lactobacillus algidus DSM 15638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.