STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK76859.1Sugar kinase and transcription regulator. (294 aa)    
Predicted Functional Partners:
KRK76860.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.791
KRK76857.1
PTS system, cellobiose-specific IIA component.
  
  
 0.783
KRK76858.1
Hypothetical protein.
       0.773
KRK76855.1
Phosphotransferase system lactose cellobiose-specific llB subunit family protein.
  
  
 0.754
KRK76856.1
PTS system, lactose cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 0.754
KRK77691.1
Beta-glucosides PTS, EIIABC.
  
 
 0.683
KRK76875.1
PTS enzyme IIABC.
  
 
 0.683
KRK76787.1
PTS system glucose-specific transporter subunit IICBA.
  
 
 0.683
KRK76412.1
Beta-glucosides PTS, EIIABC.
  
 
 0.683
KRK78298.1
Sucrose PTS, EIIBCA.
  
 
 0.683
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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