STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK40604.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
KRK39990.1
Hydrolase of the HAD superfamily protein.
     0.786
KRK32525.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
      0.762
KRK40605.1
TetR family transcriptional regulator.
 
    0.757
KRK40606.1
Short-chain dehydrogenase reductase SDR.
 
     0.590
KRK32537.1
BadF BadG BcrA BcrD ATPase family protein.
 
     0.553
KRK40679.1
MarR family transcriptional regulator.
  
     0.469
KRK33186.1
Hypothetical protein.
  
     0.448
KRK40678.1
Transporter LysE family protein.
  
     0.401
Your Current Organism:
Lactobacillus bifermentans
NCBI taxonomy Id: 1423726
Other names: L. bifermentans DSM 20003, Lactobacillus bifermentans DSM 20003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.