STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM72535.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
KRM72200.1
Hypothetical protein.
  
     0.770
KRM73072.1
Hypothetical protein.
  
     0.748
KRM71299.1
Hypothetical protein.
  
     0.732
KRM72394.1
Hypothetical protein.
  
     0.692
KRM72536.1
Hypothetical protein.
       0.682
KRM72537.1
ABC transporter transmembrane region family protein.
       0.682
KRM71346.1
Hypothetical protein.
  
     0.668
KRM72967.1
Hypothetical protein.
  
     0.633
KRM72534.1
Hypothetical protein; Belongs to the UPF0356 family.
       0.596
rnj
mRNA degradation ribonuclease J1 J2, metallo-beta-lactamase superfamily enzyme; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.558
Your Current Organism:
Lactobacillus brantae
NCBI taxonomy Id: 1423727
Other names: L. brantae DSM 23927, Lactobacillus brantae DSM 23927, Lactobacillus brantae SL1108, Lactobacillus sp. SL1108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.