STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM91904.1Hypothetical protein; Belongs to the UPF0374 family. (181 aa)    
Predicted Functional Partners:
recX
Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family.
      0.846
KRM91075.1
Hypothetical protein.
 
    0.667
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.631
KRM91905.1
tRNA (Uracil-5-) -methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.623
KRM90628.1
Hypothetical protein.
  
     0.563
KRM91903.1
Hypothetical protein.
       0.550
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
     0.472
KRM91902.1
Teichoic acid translocation ATP-binding protein.
 
     0.468
KRM92118.1
Universal stress protein UspA-like nucleotide-binding protein.
  
     0.468
KRM90601.1
Phosphotransferase family protein.
  
     0.466
Your Current Organism:
Lactobacillus cacaonum
NCBI taxonomy Id: 1423729
Other names: L. cacaonum DSM 21116, Lactobacillus cacaonum DSM 21116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.