STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM34842.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
KRM34843.1
Hypothetical protein.
 
 0.985
KRM34844.1
PTS system mannose fructose sorbose family IIDsubunit.
 
 0.983
KRM34841.1
Hypothetical protein.
 
 
 0.961
KRM34834.1
Hypothetical protein.
 
 0.942
KRM31421.1
PTS system sorbose-specific iic component.
 
 0.940
KRM35460.1
PTS family mannose fructose sorbose porter component IID.
 
 0.936
KRM35461.1
PTS family mannose fructose sorbose porter component IIC.
 
 0.935
KRM35492.1
PTS system sorbose transporter subunit IIC.
 
 0.933
KRM31422.1
PTS system mannose fructose sorbose family IIDsubunit.
 
 0.932
KRM35493.1
PTS system sorbose transporter subunit IID.
 
 0.932
Your Current Organism:
Lactobacillus composti
NCBI taxonomy Id: 1423734
Other names: L. composti DSM 18527 = JCM 14202, Lactobacillus composti DSM 18527, Lactobacillus composti DSM 18527 = JCM 14202, Lactobacillus composti JCM 14202, Lactobacillus composti JCM 14202 = DSM 18527
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.