STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM79552.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
KRM79551.1
Cadmium resistance protein.
  
  
 0.858
KRM78937.1
Cadmium transporting P-type ATPase.
  
  
 0.476
CadA
Cadmium-translocating P-type ATPase.
  
  
 0.476
KRM78517.1
Cation transport ATPase.
  
  
 0.476
KRM79555.1
P-ATPase superfamily P-type ATPase copper transporter.
  
  
 0.476
KRM79550.1
Transport protein.
       0.456
KRM79553.1
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein.
       0.449
ArsC
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.409
KRM78807.1
Putative cadmium resistance transporter.
  
  
 0.401
Your Current Organism:
Lactobacillus dextrinicus
NCBI taxonomy Id: 1423738
Other names: L. dextrinicus DSM 20335, Lactobacillus dextrinicus DSM 20335
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.