rpmG protein (Lactobacillus diolivorans) - STRING interaction network

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Score

rpmG

Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)

Predicted Functional Partners:

rpsN

0.998

KRL65292.1

0.997

rplM

0.997

rplQ

0.997

rpsK

0.997

rpsM

0.997

rpmD

0.997

rpsH

0.997

rpsC

0.997

rpsS

0.997

Your Current Organism:

Lactobacillus diolivorans

NCBI taxonomy Id: 1423739
Other names: L. diolivorans DSM 14421, Lactobacillus diolivorans DSM 14421

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRL65292.1	rplM	FC85_GL000115	FC85_GL000116	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
KRL65292.1	rplQ	FC85_GL000115	FC85_GL000121	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	50S ribosomal protein L17.	0.999
KRL65292.1	rpmD	FC85_GL000115	FC85_GL000129	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Hypothetical protein.	0.994
KRL65292.1	rpmG	FC85_GL000115	FC85_GL000014	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family.	0.997
KRL65292.1	rpsC	FC85_GL000115	FC85_GL000140	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
KRL65292.1	rpsH	FC85_GL000115	FC85_GL000133	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.998
KRL65292.1	rpsK	FC85_GL000115	FC85_GL000123	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
KRL65292.1	rpsM	FC85_GL000115	FC85_GL000124	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.998
KRL65292.1	rpsN	FC85_GL000115	FC85_GL000015	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
KRL65292.1	rpsS	FC85_GL000115	FC85_GL000142	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.998
rplM	KRL65292.1	FC85_GL000116	FC85_GL000115	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rplQ	FC85_GL000116	FC85_GL000121	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L17.	0.998
rplM	rpmD	FC85_GL000116	FC85_GL000129	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein.	0.999
rplM	rpmG	FC85_GL000116	FC85_GL000014	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplM	rpsC	FC85_GL000116	FC85_GL000140	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplM	rpsH	FC85_GL000116	FC85_GL000133	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.998
rplM	rpsK	FC85_GL000116	FC85_GL000123	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rplM	rpsM	FC85_GL000116	FC85_GL000124	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.998
rplM	rpsN	FC85_GL000116	FC85_GL000015	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rplM	rpsS	FC85_GL000116	FC85_GL000142	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.998