STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM11072.1Spermidine putrescine ABC superfamily ATP binding cassette transporter, permease protein. (273 aa)    
Predicted Functional Partners:
KRM11073.1
Spermidine putrescine ABC superfamily ATP binding cassette transporter, substrate binding protein.
 
 0.999
potA-2
ABC superfamily ATP binding cassette transporter, ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.998
KRM11071.1
Spermidine putrescine ABC superfamily ATP binding cassette transporter, permease protein.
 
0.998
KRM11201.1
Spermidine putrescine ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.991
KRM11198.1
Spermidine putrescine ABC superfamily ATP binding cassette transporter, membrane protein.
 
0.987
potA
ABC superfamily ATP binding cassette transporter, ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.924
KRM11074.1
Hypothetical protein.
       0.554
KRM11069.1
Hypothetical protein.
       0.553
KRM11075.1
MFS family major facilitator transporter.
       0.512
KRM09172.1
Glycerol-3-phosphate-transporting ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.474
Your Current Organism:
Lactobacillus farraginis
NCBI taxonomy Id: 1423743
Other names: L. farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis DSM 18382, Lactobacillus farraginis DSM 18382 = JCM 14108, Lactobacillus farraginis JCM 14108, Lactobacillus farraginis JCM 14108 = DSM 18382
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