STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311215_01643Unannotated protein. (216 aa)    
Predicted Functional Partners:
FC87_GL000513
Unannotated protein.
 
 0.993
FC87_GL000514
Unannotated protein.
     0.981
GCA_001311215_01645
Unannotated protein.
 
 0.976
FC87_GL000983
Unannotated protein.
 
 0.969
FC87_GL000493
Unannotated protein.
 
 0.953
FC87_GL000946
Unannotated protein; Belongs to the pyruvate kinase family.
    
  0.908
FC87_GL000515
Unannotated protein.
       0.775
GCA_001311215_01642
Unannotated protein.
       0.775
FC87_GL000491
Unannotated protein.
  
 
 0.552
ychF
Unannotated protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.551
Your Current Organism:
Lactobacillus florum
NCBI taxonomy Id: 1423745
Other names: L. florum DSM 22689 = JCM 16035, Lactobacillus florum DSM 22689, Lactobacillus florum DSM 22689 = JCM 16035, Lactobacillus florum F9-1, Lactobacillus florum JCM 16035, Lactobacillus florum JCM 16035 = DSM 22689, Lactobacillus florum NRIC 0771, Lactobacillus sp. F9-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.