STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL59209.1Tyrosine decarboxylase. (624 aa)    
Predicted Functional Partners:
KRL60823.1
Hypothetical protein.
    
 0.929
gshAB
Glutamate--cysteine ligase gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.
    
 0.870
KRL61782.1
Hypothetical protein.
    
 0.812
KRL59210.1
Hypothetical protein.
       0.723
KRL61531.1
alpha-Glycerophosphate Oxidase.
   
   0.625
KRL59867.1
Hypothetical protein.
     
 0.609
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
    
 0.606
KRL58342.1
aspD protein.
  
 
 0.604
KRL59378.1
NLPA lipofamily protein; Belongs to the nlpA lipoprotein family.
    
   0.600
KRL62053.1
NAD-dependent aldehyde dehydrogenase.
   
 0.581
Your Current Organism:
Lactobacillus fuchuensis
NCBI taxonomy Id: 1423747
Other names: L. fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis DSM 14340, Lactobacillus fuchuensis DSM 14340 = JCM 11249, Lactobacillus fuchuensis JCM 11249, Lactobacillus fuchuensis JCM 11249 = DSM 14340
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.