STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL19733.1ABC superfamily ATP binding cassette transporter, membrane protein. (401 aa)    
Predicted Functional Partners:
KRL19734.1
ABC transporter, ATP-binding protein.
  
 0.972
KRL19735.1
Hypothetical protein.
       0.645
KRL21997.1
ABC transporter ATP-binding protein.
 
  
 0.624
KRL19730.1
PTS family fructose porter, IIABC component.
  
 
 0.507
KRL19736.1
Hypothetical protein.
       0.505
KRL19737.1
Hypothetical protein.
       0.484
KRL24529.1
Major facilitator superfamily permease.
 
 
   0.481
KRL21996.1
Hypothetical protein.
 
     0.458
KRL19731.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
       0.437
KRL19732.1
Deor family transcriptional regulator.
       0.437
Your Current Organism:
Lactobacillus gallinarum
NCBI taxonomy Id: 1423748
Other names: L. gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum DSM 10532, Lactobacillus gallinarum DSM 10532 = JCM 2011, Lactobacillus gallinarum JCM 2011, Lactobacillus gallinarum JCM 2011 = DSM 10532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.