STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM05787.1Threonine dehydratase. (262 aa)    
Predicted Functional Partners:
KRM05786.1
Threonine dehydratase.
     0.991
KRM06301.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
 0.971
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
  
 0.949
KRM05659.1
Threonine synthase.
  
 
 0.887
KRM07055.1
Branched-chain-amino-acid transaminase.
  
 
 0.871
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.843
KRM05788.1
Hypothetical protein.
 
    0.838
KRM05784.1
Acetolactate synthase catalytic subunit.
  
 0.826
trpA
Tryptophan synthase; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
 
 0.814
KRM04072.1
L-serine dehydratase, beta subunit.
  
 
 0.807
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.