STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM04495.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
KRM06152.1
DoxX family protein.
  
     0.631
KRM07709.1
Hypothetical protein.
  
     0.620
KRM07916.1
Hypothetical protein.
  
     0.585
KRM06464.1
Hypothetical protein.
  
     0.577
KRM08134.1
Hypothetical protein.
  
     0.545
KRM04496.1
Glutamine ABC superfamily ATP binding cassette transporter, ABC protein.
       0.538
KRM04497.1
Glutamine-binding protein glutamine transport system permease.
       0.538
KRM08256.1
Integrase recombinase xerD.
  
     0.520
KRM04494.1
Multidrug resistance efflux pump.
       0.509
KRM05504.1
Hypothetical protein.
  
     0.471
Your Current Organism:
Lactobacillus ghanensis
NCBI taxonomy Id: 1423750
Other names: L. ghanensis DSM 18630, Lactobacillus ghanensis DSM 18630
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.