STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN14212.1ABC superfamily ATP binding cassette transporter, membrane protein. (353 aa)    
Predicted Functional Partners:
KRN14213.1
ABC superfamily ATP binding cassette transporter, binding protein.
 
 0.996
KRN14211.1
Transcriptional regulator.
 
  
 0.954
KRN14046.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
 0.865
KRN13844.1
Cell division ATP-binding protein FtsE.
  
 0.865
KRN12253.1
ABC-type antimicrobial peptide transport system, atpase component.
  
 0.790
KRN10214.1
Cell division ATP-binding protein FtsE.
  
 0.790
KRN14210.1
Phosphoglycerate mutase.
       0.536
KRN09413.1
D-alanyl-lipoteichoic acid biosynthesis protein DltD.
  
     0.465
KRN14209.1
Alpha beta fold family hydrolase.
  
    0.413
Your Current Organism:
Lactobacillus gigeriorum
NCBI taxonomy Id: 1423751
Other names: L. gigeriorum DSM 23908 = CRBIP 24.85, Lactobacillus gigeriorum 202, Lactobacillus gigeriorum CRBIP 24.85, Lactobacillus gigeriorum CRBIP 24.85 = DSM 23908, Lactobacillus gigeriorum DSM 23908, Lactobacillus gigeriorum DSM 23908 = CRBIP 24.85
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