STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM39920.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
KRM39919.1
Hypothetical protein.
 
 
 0.849
KRM39921.1
Capsular biosynthesis protein.
  
 
  0.776
KRM39918.1
Hypothetical protein.
 
    
0.715
KRM39922.1
Hypothetical protein.
       0.714
KRM40718.1
Alpha beta superfamily hydrolase.
   
 
 0.686
KRM41163.1
Alpha beta hydrolase.
   
 
 0.686
KRM39917.1
Hypothetical protein.
 
    
0.648
KRM40753.1
Serine-threonine protein phosphatase.
    
 0.618
KRM37486.1
ATP-dependent helicase RecQ.
    
   0.608
KRM39916.1
Sugar-transferase.
 
  
 0.565
Your Current Organism:
Lactobacillus hamsteri
NCBI taxonomy Id: 1423754
Other names: L. hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri DSM 5661, Lactobacillus hamsteri DSM 5661 = JCM 6256, Lactobacillus hamsteri JCM 6256, Lactobacillus hamsteri JCM 6256 = DSM 5661
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.