STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM18097.1Appr-1-p processing domain protein. (172 aa)    
Predicted Functional Partners:
KRM15699.1
ADP-ribosylglycohydrolase.
    
 0.910
KRM18099.1
Lactose transport regulator.
       0.774
KRM18098.1
Hypothetical protein.
       0.773
KRM17714.1
Acetyltransferase.
 
      0.703
KRM14450.1
Chromosome segregation helicase.
      0.702
cmk
Cytidylate kinase.
 
      0.647
KRM17560.1
Putative NADH oxidase (putative).
  
 0.492
KRM17610.1
Recombination factor protein RarA.
      0.481
KRM18100.1
Hypothetical protein.
       0.480
KRM17235.1
NADH oxidase.
  
 0.461
Your Current Organism:
Lactobacillus nantensis
NCBI taxonomy Id: 1423774
Other names: L. nantensis DSM 16982, Lactobacillus nantensis DSM 16982
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