STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK97735.1Hypothetical protein. (1245 aa)    
Predicted Functional Partners:
KRK96872.1
Hypothetical protein.
  
     0.650
KRK98600.1
Adhesion exoprotein.
  
     0.603
KRK98515.1
Hypothetical protein.
  
     0.583
KRK99848.1
Hypothetical protein.
  
  
 0.559
KRK98634.1
Hypothetical protein.
  
     0.525
KRK98666.1
Hypothetical protein.
  
     0.519
KRK97523.1
Hypothetical protein.
  
    0.508
KRK98539.1
Hypothetical protein.
  
     0.476
KRK98516.1
ABC transporter ATPase.
  
     0.470
KRK98863.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Lactobacillus odoratitofui
NCBI taxonomy Id: 1423776
Other names: L. odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui DSM 19909, Lactobacillus odoratitofui DSM 19909 = JCM 15043, Lactobacillus odoratitofui JCM 15043, Lactobacillus odoratitofui JCM 15043 = DSM 19909, Lactobacillus sp. YIT 11304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.