STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL05382.1LacI family transcriptional regulator. (327 aa)    
Predicted Functional Partners:
KRL04135.1
Glutamate synthase large subunit.
    
 
 0.954
KRL05787.1
N-acetylglucosamine PTS, EIICBA.
    
 0.929
KRL05925.1
Trehalose PTS II ABC.
    
 0.929
KRL05926.1
PTS system, trehalose-specific IIBC component.
    
 0.929
KRL04498.1
PTS system sucrose-specific transporter subunit IIABC.
    
 0.929
KRL05383.1
Permease, major facilitator superfamily.
 
   
 0.874
KRL05979.1
Phosphocarrier protein HPr.
   
 
 0.873
KRL04330.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.809
KRL05384.1
Oligo-1,6-glucosidase.
 
 
 0.720
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.717
Your Current Organism:
Lactobacillus oeni
NCBI taxonomy Id: 1423777
Other names: L. oeni DSM 19972, Lactobacillus oeni DSM 19972
Server load: low (28%) [HD]