STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL11494.1Hypothetical protein. (683 aa)    
Predicted Functional Partners:
KRL11495.1
Hypothetical protein.
 
     0.912
KRL11468.1
Lactocepin; Belongs to the peptidase S8 family.
 
 0.855
KRL11491.1
Oligogalacturonide transporter.
 
     0.854
KRL10989.1
Collagen binding domain-containing protein.
 
  
 0.789
KRL10904.1
Hypothetical protein.
 
 0.781
KRL09318.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.730
KRL08536.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
   0.730
KRL08954.1
Hypothetical protein.
    
 
 0.727
KRL09939.1
Hypothetical protein.
 
  
  0.714
KRL10172.1
Hypothetical protein.
  
     0.712
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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