STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM68106.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
KRM67690.1
Phosphate acetyltransferase.
    
 0.980
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.952
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
  0.933
KRM69092.1
Acetaldehyde dehydrogenase (acetylating).
    
 0.919
KRM68854.1
Acetaldehyde dehydrogenase, acetylating; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.919
KRM68105.1
tRNA rRNA methyltransferase ysgA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.734
KRM68107.1
Membrane protein insertase, YidC Oxa1 family.
  
    0.732
KRM67533.1
Malate dehydrogenase.
    
 0.702
KRM68104.1
Metal dependent phosphohydrolase.
     
 0.553
KRM68103.1
Hypothetical protein.
       0.537
Your Current Organism:
Lactobacillus ozensis
NCBI taxonomy Id: 1423781
Other names: L. ozensis DSM 23829 = JCM 17196, Lactobacillus ozensis DSM 23829, Lactobacillus ozensis DSM 23829 = JCM 17196, Lactobacillus ozensis JCM 17196, Lactobacillus ozensis JCM 17196 = DSM 23829, Lactobacillus ozensis Mizu2-1, Lactobacillus sp. Mizu2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.