STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL88131.1ABC transporter periplasmic subunit. (553 aa)    
Predicted Functional Partners:
KRL88120.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.916
KRL88119.1
Oligopeptide ABC transporter permease.
 
 0.906
KRL88118.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.863
KRL88117.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.793
KRL86743.1
ABC-type oligopeptide transport system, periplasmic component.
 
  
 
0.769
KRL86763.1
Oligopeptide ABC superfamily ATP binding cassette transporter, permease protein.
 
 
 0.675
KRL86765.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.662
KRL86762.1
Oligopeptide ABC transporter permease.
 
 
 0.633
KRL86759.1
Abc transporter, substrate-binding protein, family 5.
  
 
 0.619
KRL86760.1
Oligopeptide ABC transporter substrate-binding protein.
  
 
0.619
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.