STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK81769.1Transcriptional regulator. (234 aa)    
Predicted Functional Partners:
KRK81770.1
Pts systemtrehalose-specific iib component.
 
  
 0.859
KRK81771.1
Trehalose 6-phosphate phosphorylase.
       0.627
KRK81768.1
Ribose-phosphate pyrophosphokinase.
  
 
  0.537
KRK84056.1
Helix-turn-helix domain-containing protein.
  
  
 0.522
KRK82253.1
AraC-like transcriptional regulator.
  
  
 0.522
KRK83608.1
Beta-glucosides PTS, EIIABC.
 
  
 0.438
KRK81743.1
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.434
KRK81772.1
Epimerase.
  
    0.430
KRK82343.1
Double-stranded beta-helix-like protein.
  
    0.417
KRK82422.1
Beta-glucosides PTS, EIIABC.
 
  
 0.417
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.