STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK84126.1Hypothetical protein. (541 aa)    
Predicted Functional Partners:
KRK83463.1
Major capsid protein.
  
     0.714
KRK83470.1
Hypothetical protein.
  
     0.680
KRK83460.1
Phage terminase, large subunit.
  
     0.660
KRK84125.1
GntR family transcriptional regulator.
       0.547
KRK82986.1
HAD superfamily hydrolase.
  
     0.508
KRK83472.1
Phage endopeptidase.
  
     0.448
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.