STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK82550.1Histidine protein kinase plnc8k. (406 aa)    
Predicted Functional Partners:
KRK82549.1
Response regulator.
 
 0.998
KRK81437.1
Response regulator.
 
  
 0.971
KRK83936.1
Response regulator.
 
  
 0.971
KRK83313.1
Response regulator.
 
  
 0.971
KRK83589.1
Response regulator.
 
  
 0.970
KRK81436.1
Signal transduction protein.
 
  
0.879
KRK83938.1
Signal transduction protein.
 
  
0.878
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.860
KRK83937.1
Signal transduction protein.
 
  
 0.855
KRK83022.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.828
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.