STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12379.1Phosphomevalonate kinase. (367 aa)    
Predicted Functional Partners:
KRL14045.1
mvaD protein.
 
 0.998
KRL14046.1
Mevalonate kinase.
 
 
 0.996
fni
Idi protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 0.990
KRL13357.1
acetoacetyl-CoA thiolase 3-hydroxy-3-methylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
 
 0.987
KRL13358.1
3-hydroxy-3-methylglutaryl-CoA synthase.
 
 
 0.943
KRL12378.1
L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenase.
  
 
 0.766
KRL13356.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.608
KRL12723.1
Dihydrodipicolinate synthase N-acetylneuraminate lyase.
  
 
 0.589
KRL11131.1
3-hydroxybutyryl-CoA dehydrogenase.
     
 0.561
KRL13850.1
Hypothetical protein; Belongs to the heat shock protein 70 family.
    
 
 0.454
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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