STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM36221.1Abc transporter atp-binding component. (231 aa)    
Predicted Functional Partners:
KRM36220.1
Hypothetical protein.
 0.999
KRM36222.1
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.996
KRM37159.1
ABC superfamily ATP binding cassette transporter permease protein.
  
 0.892
KRM36397.1
Polar amino acid ABC transporter inner membrane protein.
 
 
  0.869
KRM37157.1
ABC transporter related.
 
0.866
KRM36213.1
Efflux ABC transporter, permease protein.
  
 0.857
KRM37462.1
ABC transporter, permease protein.
 
 0.841
KRM35326.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.839
KRM37867.1
Cobalt transport protein.
 
   
  0.697
KRM35516.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
  0.672
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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