Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRM35221.1 | KRM35358.1 | FD34_GL000731 | FD34_GL000870 | Hypothetical protein. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.652 |
| KRM35221.1 | rpsT | FD34_GL000731 | FD34_GL000773 | Hypothetical protein. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.625 |
| KRM35356.1 | KRM35358.1 | FD34_GL000868 | FD34_GL000870 | Ribosomal protein S1. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.674 |
| KRM35356.1 | KRM35359.1 | FD34_GL000868 | FD34_GL000871 | Ribosomal protein S1. | Tetratricopeptide repeat protein. | 0.730 |
| KRM35356.1 | der | FD34_GL000868 | FD34_GL000869 | Ribosomal protein S1. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.753 |
| KRM35356.1 | rpsT | FD34_GL000868 | FD34_GL000773 | Ribosomal protein S1. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.936 |
| KRM35358.1 | KRM35221.1 | FD34_GL000870 | FD34_GL000731 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.652 |
| KRM35358.1 | KRM35356.1 | FD34_GL000870 | FD34_GL000868 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosomal protein S1. | 0.674 |
| KRM35358.1 | KRM35359.1 | FD34_GL000870 | FD34_GL000871 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Tetratricopeptide repeat protein. | 0.759 |
| KRM35358.1 | KRM35507.1 | FD34_GL000870 | FD34_GL000674 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.652 |
| KRM35358.1 | KRM35684.1 | FD34_GL000870 | FD34_GL000570 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Replicative DNA helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.666 |
| KRM35358.1 | der | FD34_GL000870 | FD34_GL000869 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.875 |
| KRM35358.1 | dnaA | FD34_GL000870 | FD34_GL000557 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.698 |
| KRM35358.1 | dnaG | FD34_GL000870 | FD34_GL000848 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.705 |
| KRM35358.1 | rpsT | FD34_GL000870 | FD34_GL000773 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.666 |
| KRM35358.1 | topA | FD34_GL000870 | FD34_GL000885 | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Dna topoisomerase i; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.810 |
| KRM35359.1 | KRM35356.1 | FD34_GL000871 | FD34_GL000868 | Tetratricopeptide repeat protein. | Ribosomal protein S1. | 0.730 |
| KRM35359.1 | KRM35358.1 | FD34_GL000871 | FD34_GL000870 | Tetratricopeptide repeat protein. | DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.759 |
| KRM35359.1 | der | FD34_GL000871 | FD34_GL000869 | Tetratricopeptide repeat protein. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.562 |
| KRM35359.1 | dnaA | FD34_GL000871 | FD34_GL000557 | Tetratricopeptide repeat protein. | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.416 |
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