STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN06877.1Aryl-alcohol dehydrogenase. (372 aa)    
Predicted Functional Partners:
KRN07076.1
Alcohol-acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.980
KRN05687.1
Hypothetical protein.
   
 0.902
tadA
Cytosine adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
  0.743
KRN06871.1
AraC family transcriptional regulator.
 
     0.658
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
    
 0.641
KRN06999.1
L-iditol 2-dehydrogenase.
  
 
0.619
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
     0.553
KRN06872.1
L-rhamnose-proton symport.
 
     0.547
KRN06899.1
Hypothetical protein.
     
 0.526
rhaB
Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.
 
    0.486
Your Current Organism:
Lactobacillus sucicola
NCBI taxonomy Id: 1423806
Other names: L. sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola DSM 21376, Lactobacillus sucicola DSM 21376 = JCM 15457, Lactobacillus sucicola JCM 15457, Lactobacillus sucicola JCM 15457 = DSM 21376
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