STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL65573.1Thioredoxin reductase. (329 aa)    
Predicted Functional Partners:
KRL67249.1
Pyridine nucleotide-disulfide oxidoreductase family protein.
    
 0.852
KRL68322.1
Thioredoxin.
  
 0.739
KRL67615.1
Alkyl hydroperoxide reductase.
  
 
 0.739
KRL67318.1
Thioredoxin reductase.
 
0.733
KRL66146.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.706
KRL67319.1
Hypothetical protein.
  
 0.693
KRL65572.1
Membrane-associated protein.
       0.686
KRL66817.1
Thioredoxin.
  
 0.668
KRL65603.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.668
KRL66164.1
Arylsulfate sulfotransferase.
  
 0.651
Your Current Organism:
Lactobacillus versmoldensis
NCBI taxonomy Id: 1423815
Other names: L. versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis DSM 14857, Lactobacillus versmoldensis DSM 14857 = KCTC 3814, Lactobacillus versmoldensis KCTC 3814, Lactobacillus versmoldensis KCTC 3814 = DSM 14857
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