STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09587.1Zn-dependent protease. (188 aa)    
Predicted Functional Partners:
KRL15437.1
Hypothetical protein.
  
     0.649
KRL15179.1
Hypothetical protein.
  
     0.558
KRL11775.1
Hypothetical protein.
  
     0.516
KRL16595.1
Immunity protein PlnI.
  
     0.484
KRL15039.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
     0.476
KRL15054.1
Hypothetical protein.
  
     0.475
KRL08630.1
Hypothetical protein.
  
     0.445
KRL11169.1
Transcriptional regulator.
  
     0.429
KRL08717.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.414
KRL12644.1
Glycosyltransferase.
  
     0.410
Your Current Organism:
Lactobacillus zymae
NCBI taxonomy Id: 1423817
Other names: L. zymae DSM 19395, Lactobacillus zymae DSM 19395
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.