STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK94916.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
KRK94914.1
Hypothetical protein.
       0.658
KRK94915.1
Hypothetical protein.
       0.658
KRK94917.1
Hypothetical protein.
       0.588
KRK94918.1
Adenine-specific DNA methyltransferase.
       0.472
ackA
Acetate kinase (acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.463
KRK94912.1
ComG operon protein 2.
       0.408
KRK94913.1
Pilin-like component of the DNA transport membrane platform.
       0.408
KRK94911.1
Competence protein.
       0.407
Your Current Organism:
Lactobacillus futsaii
NCBI taxonomy Id: 1423818
Other names: L. futsaii JCM 17355, Lactobacillus futsaii JCM 17355, Lactobacillus futsaii YM 0097, Lactobacillus sp. YM 0097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.