STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ94267.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SJZ94252.1
Putative sporulation protein YtxC.
 
     0.670
SJZ76157.1
MoxR-like ATPase.
  
 
 0.615
SJZ44223.1
Hypothetical protein.
  
     0.528
SJZ87995.1
Spore germination protein.
  
     0.524
SJZ54308.1
Protein of unknown function.
  
     0.514
SJZ37303.1
cob(I)alamin adenosyltransferase.
     
 0.495
SJZ69582.1
Hypothetical protein.
  
     0.474
SJZ64584.1
c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains.
  
     0.470
SJZ91073.1
Spore germination protein KC.
  
    0.467
SJZ91110.1
Spore germination protein KB.
  
     0.461
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.