STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001956915_03830Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_001956915_03829
Unannotated protein.
 
 0.999
GCA_001956915_03831
Unannotated protein.
  
 0.997
GCA_001956915_03289
Unannotated protein.
     
 0.969
GCA_001956915_00992
Unannotated protein.
     
 0.905
GCA_001956915_03828
Unannotated protein.
   
 0.872
GCA_001956915_03841
Unannotated protein.
 
   
 0.810
GCA_001956915_00509
Unannotated protein.
  
 
  0.808
GCA_001956915_01515
Unannotated protein.
  
 
  0.808
GCA_001956915_03330
Unannotated protein.
   
 
 0.790
GCA_001956915_03436
Unannotated protein.
   
 
 0.780
Your Current Organism:
Intrasporangium flavum
NCBI taxonomy Id: 1428657
Other names: DSM 29621, I. flavum, Intrasporangium flavum (Azman et al. 2016) Nouioui et al. 2018, MCCC 1K00454, Monashia flava, Monashia flava Azman et al. 2016, NBRC 110749, Terrabacter sp. MUSC 78, strain MUSC 78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.