STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX11110.1Formylmethanofuran dehydrogenase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
KIX12127.1
Protein FwdD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.798
KIX12128.1
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.748
KIX12234.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.748
KIX13483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.740
KIX13448.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.739
KIX12129.1
Formylmethanofuran dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.718
KIX14500.1
acetyl-CoA decarbonylase; In acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.714
KIX13627.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.707
KIX14501.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.701
KIX11111.1
RhtX/FptX family siderophore transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
Your Current Organism:
Dethiosulfatarculus sandiegensis
NCBI taxonomy Id: 1429043
Other names: D. sandiegensis, DSM 100305, Deltaproteobacteria bacterium SPR, Desulfarculus sp. SPR, Dethiosulfatarculus sandiegensis Davidova et al. 2016, JCM 30857, strain SPR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.