STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001885685_00220Unannotated protein. (272 aa)    
Predicted Functional Partners:
GCA_001885685_01652
Unannotated protein.
    
 0.857
GCA_001885685_00219
Unannotated protein.
  
    0.826
GCA_001885685_00221
Unannotated protein.
       0.800
gatA
Unannotated protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
  
 
 0.759
GCA_001885685_02474
Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.759
GCA_001885685_02529
Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.741
GCA_001885685_00224
Unannotated protein; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
     
 0.732
GCA_001885685_00222
Unannotated protein.
       0.726
GCA_001885685_00223
Unannotated protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.726
GCA_001885685_00225
Unannotated protein; Involved in formation and maintenance of cell shape.
       0.726
Your Current Organism:
Pseudomonas hussainii
NCBI taxonomy Id: 1429083
Other names: BCRC 80696, JCM 19513, P. hussainii, Pseudomonas hussainii Hameed et al. 2014, Pseudomonas sp. CC-AMH-11, Pseudomonas sp. CC-AMHZ-5, strain CC-AMH-11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.