STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001469165_00681Unannotated protein. (520 aa)    
Predicted Functional Partners:
GCA_001469165_01781
Unannotated protein.
    
 0.982
GCA_001469165_03137
Unannotated protein.
   
 
 0.964
GCA_001469165_03212
Unannotated protein.
  
 0.952
GCA_001469165_03318
Unannotated protein.
  
  
 0.906
GCA_001469165_02616
Unannotated protein.
   
 0.904
GCA_001469165_03175
Unannotated protein.
    
 0.904
GCA_001469165_04398
Unannotated protein.
    
 
 0.902
GCA_001469165_01014
Unannotated protein.
  
 0.892
GCA_001469165_03067
Unannotated protein.
   
 
 0.887
GCA_001469165_05283
Unannotated protein.
    
 
 0.859
Your Current Organism:
Thiohalocapsa sp. ML1
NCBI taxonomy Id: 1431688
Other names: Amoebobacter purpurea ML1, Chromatiaceae bacterium ML1, Lamprocystis purpurea ML1, T. sp. ML1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.