STRINGSTRING
JQMD01000001_gene10 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000001_gene10" - annotation not available in Zobellia uliginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000001_gene10annotation not available (332 aa)    
Predicted Functional Partners:
JQMD01000002_gene3245
annotation not available (156 aa)
   
  0.958
JQMD01000001_gene7
annotation not available (356 aa)
 
  0.952
JQMD01000001_gene9
annotation not available (353 aa)
 
     
  0.929
JQMD01000001_gene8
annotation not available (164 aa)
              0.845
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (418 aa)
       
  0.781
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (438 aa)
       
  0.760
JQMD01000002_gene3131
annotation not available (408 aa)
   
   
 
0.705
JQMD01000001_gene18
annotation not available (356 aa)
 
  0.705
JQMD01000002_gene2458
annotation not available (415 aa)
   
   
 
0.705
JQMD01000002_gene2459
annotation not available (471 aa)
 
     
  0.630
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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