STRINGSTRING
JQMD01000001_gene7 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000001_gene7" - annotation not available in Zobellia uliginosa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000001_gene7annotation not available (356 aa)    
Predicted Functional Partners:
JQMD01000001_gene9
annotation not available (353 aa)
 
          0.965
JQMD01000001_gene10
annotation not available (332 aa)
 
  0.952
JQMD01000001_gene8
annotation not available (164 aa)
              0.845
JQMD01000002_gene1330
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (372 aa)
   
      0.796
JQMD01000001_gene13
annotation not available (319 aa)
              0.618
JQMD01000001_gene12
annotation not available (74 aa)
              0.618
JQMD01000001_gene11
annotation not available (143 aa)
              0.618
JQMD01000002_gene2458
annotation not available (415 aa)
 
  0.560
JQMD01000002_gene3131
annotation not available (408 aa)
 
  0.558
JQMD01000002_gene2443
annotation not available (1095 aa)
   
 
  0.470
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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