STRINGSTRING
JQMD01000002_gene107 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene107" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene107annotation not available (191 aa)    
Predicted Functional Partners:
JQMD01000002_gene108
annotation not available (367 aa)
 
      0.849
JQMD01000002_gene1301
annotation not available (312 aa)
   
      0.702
JQMD01000002_gene2480
annotation not available (367 aa)
   
      0.681
JQMD01000002_gene1182
annotation not available (384 aa)
 
      0.673
JQMD01000002_gene1178
annotation not available (375 aa)
   
      0.668
JQMD01000002_gene3705
annotation not available (387 aa)
   
      0.667
JQMD01000002_gene2364
annotation not available (378 aa)
   
      0.664
JQMD01000002_gene1238
annotation not available (387 aa)
   
      0.658
JQMD01000002_gene1795
annotation not available (377 aa)
   
      0.648
JQMD01000002_gene1731
annotation not available (377 aa)
   
      0.648
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
Server load: low (6%) [HD]