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JQMD01000002_gene1070 protein (Zobellia uliginosa) - STRING interaction network
"JQMD01000002_gene1070" - annotation not available in Zobellia uliginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JQMD01000002_gene1070annotation not available (346 aa)    
Predicted Functional Partners:
JQMD01000002_gene1072
annotation not available (357 aa)
       
    0.874
JQMD01000002_gene1069
annotation not available (117 aa)
 
   
  0.863
JQMD01000002_gene1056
annotation not available (803 aa)
 
  0.818
JQMD01000002_gene3579
annotation not available (325 aa)
 
  0.813
JQMD01000002_gene2357
annotation not available (1502 aa)
       
  0.812
JQMD01000002_gene2767
annotation not available (324 aa)
   
   
    0.808
JQMD01000002_gene3441
annotation not available (485 aa)
   
   
  0.773
JQMD01000002_gene2306
annotation not available (1128 aa)
         
  0.769
JQMD01000002_gene3051
annotation not available (348 aa)
         
  0.749
JQMD01000002_gene2908
annotation not available (117 aa)
   
          0.735
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, NBRC 14962, Z. uliginosa, Zobellia uliginosa, strain ZoBell 553
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